Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage adsorption protein nrfb | EPS94_16840 | Not Available | Negative | 3472275 - 3474512 | 85294.2 |
| cu(+)/ag(+) sensor histidine kinase cuss | EPS94_16845 | Not Available | Negative | 3474662 - 3476104 | 53779.3 |
| copper response regulator transcription factor cusr | EPS94_16850 | Not Available | Negative | 3476094 - 3476777 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | EPS94_16855 | Not Available | Positive | 3476934 - 3478316 | 50739.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EPS94_16860 | Not Available | Positive | 3478340 - 3478672 | 12210.8 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | EPS94_16865 | Not Available | Positive | 3478688 - 3479911 | 44354.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | EPS94_16870 | Not Available | Positive | 3479923 - 3483066 | 114732.0 |
| aromatic amino acid transporter arop | EPS94_16875 | Not Available | Positive | 3483168 - 3484544 | 50648.3 |
| mechanosensitive ion channel family protein | EPS94_16880 | Not Available | Negative | 3484626 - 3485873 | 46639.5 |
| oxygen-insensitive nad(p)h nitroreductase | EPS94_16885 | Not Available | Negative | 3485981 - 3486634 | 23994.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





