Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | EPS94_16790 | Not Available | Positive | 3460729 - 3461703 | 35626.8 |
| taurine dioxygenase | EPS94_16795 | Not Available | Negative | 3461743 - 3462594 | 32314.2 |
| taurine abc transporter permease tauc | EPS94_16800 | Not Available | Negative | 3462591 - 3463418 | 29548.5 |
| taurine abc transporter atp-binding subunit | EPS94_16805 | Not Available | Negative | 3463415 - 3464182 | 28180.4 |
| taurine abc transporter substrate-binding protein | EPS94_16810 | Not Available | Negative | 3464195 - 3465157 | 34331.9 |
| pig-l family deacetylase | EPS94_16815 | Not Available | Positive | 3465765 - 3466436 | 24954.2 |
| glycosyltransferase family 2 protein | EPS94_16820 | Not Available | Positive | 3466446 - 3467173 | 26753.8 |
| omptin family outer membrane protease ompt | EPS94_16825 | Not Available | Negative | 3467174 - 3467766 | 21879.6 |
| duf4434 family protein | EPS94_16830 | Not Available | Negative | 3468425 - 3469315 | 33005.5 |
| phage receptor | EPS94_16835 | Not Available | Negative | 3469316 - 3472288 | 111387.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





