Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | EPS94_16740 | Not Available | Negative | 3448474 - 3449889 | 49472.3 |
| anti-adapter protein irap | EPS94_16745 | Not Available | Negative | 3449990 - 3450250 | 9966.07 |
| d-alanine--d-alanine ligase a | EPS94_16750 | Not Available | Positive | 3450713 - 3451807 | 39348.1 |
| duf2754 domain-containing protein | EPS94_16755 | Not Available | Negative | 3451831 - 3452043 | 8097.92 |
| duf2755 family protein | EPS94_16760 | Not Available | Positive | 3452303 - 3452611 | 11425.2 |
| surface-exposed outer membrane lipoprotein yaiw | EPS94_16765 | Not Available | Negative | 3452670 - 3453764 | 40359.5 |
| peptide antibiotic transporter sbma | EPS94_16770 | Not Available | Negative | 3453777 - 3454997 | 46447.9 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | EPS94_16775 | Not Available | Positive | 3455349 - 3456506 | 41925.5 |
| hydrogen peroxide resistance inhibitor ipra | EPS94_16780 | Not Available | Negative | 3456507 - 3457130 | 23929.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | EPS94_16785 | Not Available | Negative | 3457216 - 3460203 | 107051.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





