Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | EPS94_16685 | Not Available | Positive | 3441617 - 3442528 | 33995.3 |
| hypothetical protein | EPS94_16690 | Not Available | Negative | 3442609 - 3442689 | 3060.81 |
| pyrimidine/purine nucleoside phosphorylase | EPS94_16700 | Not Available | Negative | 3443175 - 3443459 | 10234.9 |
| arom family protein | EPS94_16705 | Not Available | Negative | 3443531 - 3444208 | 24932.5 |
| protein yaia | EPS94_16710 | Not Available | Negative | 3444466 - 3444657 | 7267.52 |
| shikimate kinase arol | EPS94_16715 | Not Available | Negative | 3444707 - 3445231 | 19137.0 |
| yaii/yqxd family protein | EPS94_16720 | Not Available | Negative | 3445414 - 3445872 | 16970.4 |
| pyrroline-5-carboxylate reductase | EPS94_16725 | Not Available | Positive | 3445992 - 3446801 | 28248.7 |
| diguanylate cyclase adra | EPS94_16730 | Not Available | Negative | 3446818 - 3447933 | 41515.9 |
| phosphate starvation-inducible protein psif | EPS94_16735 | Not Available | Negative | 3448035 - 3448355 | 11687.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





