Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EPS94_16585 | Not Available | Negative | 3417071 - 3418174 | 40387.7 |
| transcriptional regulator nrdr | EPS94_16590 | Not Available | Negative | 3418178 - 3418627 | 17229.9 |
| duf3251 domain-containing protein | EPS94_16595 | Not Available | Positive | 3418778 - 3419317 | 19609.6 |
| nucleoside-specific channel-forming protein tsx | EPS94_16600 | Not Available | Positive | 3419615 - 3420499 | 33625.6 |
| hnh nuclease family protein | EPS94_16605 | Not Available | Negative | 3420537 - 3420884 | 13422.7 |
| protein translocase subunit secf | EPS94_16610 | Not Available | Negative | 3421014 - 3421985 | 35384.6 |
| protein translocase subunit secd | EPS94_16615 | Not Available | Negative | 3421996 - 3423843 | 66609.3 |
| preprotein translocase subunit yajc | EPS94_16620 | Not Available | Negative | 3423871 - 3424203 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | EPS94_16625 | Not Available | Negative | 3424226 - 3425353 | 42596.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EPS94_16630 | Not Available | Negative | 3425408 - 3426478 | 39415.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





