Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa family transcriptional regulator | EPS94_15980 | Not Available | Positive | 3294836 - 3295054 | 8230.79 |
| duf4222 domain-containing protein | EPS94_15985 | Not Available | Positive | 3295102 - 3295380 | 10925.2 |
| dna-binding protein | EPS94_15990 | Not Available | Positive | 3295352 - 3295723 | 13701.3 |
| site-specific integrase | EPS94_15995 | Not Available | Positive | 3295579 - 3296742 | 45004.4 |
| Trna-arg | Not Available | Not Available | Positive | 3296758 - 3296834 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EPS94_16005 | Not Available | Positive | 3297105 - 3297971 | 30957.5 |
| ribosome-associated protein ybcj | EPS94_16010 | Not Available | Positive | 3297973 - 3298185 | 7389.95 |
| metal-dependent hydrolase | EPS94_16015 | Not Available | Positive | 3298293 - 3298814 | 19469.5 |
| cysteine--trna ligase | EPS94_16020 | Not Available | Negative | 3298850 - 3300235 | 52186.9 |
| peptidylprolyl isomerase b | EPS94_16025 | Not Available | Positive | 3300409 - 3300903 | 18154.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





