Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family metalloprotein yjdn | EPS94_15770 | Not Available | Negative | 3255092 - 3255535 | 16154.1 |
| phna family protein | EPS94_15775 | Not Available | Negative | 3255695 - 3256030 | 12345.7 |
| clamp-binding protein crfc | EPS94_15780 | Not Available | Positive | 3256433 - 3258661 | 84417.9 |
| hypothetical protein | EPS94_15785 | Not Available | Positive | 3258658 - 3259536 | 33044.9 |
| proline/glycine betaine transporter prop | EPS94_15790 | Not Available | Positive | 3259800 - 3261302 | 54881.1 |
| lpxt activity modulator pmrr | EPS94_15795 | Not Available | Positive | 3261414 - 3261503 | 3465.23 |
| two-component system sensor histidine kinase pmrb | EPS94_15800 | Not Available | Negative | 3261479 - 3262570 | 40992.8 |
| two-component system response regulator basr | EPS94_15805 | Not Available | Negative | 3262580 - 3263248 | 25019.3 |
| phosphoethanolamine transferase epta | EPS94_15810 | Not Available | Negative | 3263245 - 3264888 | 61644.6 |
| arginine/agmatine antiporter | EPS94_15815 | Not Available | Negative | 3264992 - 3266329 | 46845.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





