Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | EPS94_15665 | Not Available | Negative | 3237704 - 3238399 | 26024.6 |
| d-allose abc transporter atp-binding protein alsa | EPS94_15675 | Not Available | Negative | 3239369 - 3240901 | 56788.4 |
| d-allose transporter substrate-binding protein | EPS94_15680 | Not Available | Negative | 3241028 - 3241963 | 32897.7 |
| murr/rpir family transcriptional regulator | EPS94_15685 | Not Available | Negative | 3242022 - 3242912 | 32364.1 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | EPS94_15690 | Not Available | Positive | 3243271 - 3243720 | 16102.3 |
| protein yjdp | EPS94_15695 | Not Available | Positive | 3243789 - 3244118 | 13439.4 |
| phosphonate metabolism protein phnp | EPS94_15700 | Not Available | Negative | 3244146 - 3244904 | 27923.3 |
| aminoalkylphosphonate n-acetyltransferase | EPS94_15705 | Not Available | Negative | 3244906 - 3245340 | 16561.8 |
| ribose 1,5-bisphosphokinase | EPS94_15710 | Not Available | Negative | 3245327 - 3245884 | 20733.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | EPS94_15715 | Not Available | Negative | 3245884 - 3247020 | 42066.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





