Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EPS94_15465 | Not Available | Negative | 3191647 - 3193467 | 69236.0 |
| acid phosphatase apha | EPS94_15470 | Not Available | Positive | 3193744 - 3194457 | 26076.9 |
| yjbq family protein | EPS94_15475 | Not Available | Positive | 3194568 - 3194984 | 15626.7 |
| mmcq/yjbr family dna-binding protein | EPS94_15480 | Not Available | Positive | 3194988 - 3195344 | 13520.2 |
| excinuclease abc subunit uvra | EPS94_15485 | Not Available | Negative | 3195379 - 3198201 | 103890.0 |
| single-stranded dna-binding protein ssb1 | EPS94_15490 | Not Available | Positive | 3198455 - 3198991 | 18976.1 |
| hypothetical protein | EPS94_15495 | Not Available | Negative | 3199090 - 3199371 | 10288.0 |
| c-di-gmp phosphodiesterase pdec | EPS94_15500 | Not Available | Positive | 3199800 - 3201386 | 60696.4 |
| superoxide response transcriptional regulator soxs | EPS94_15505 | Not Available | Negative | 3201389 - 3201712 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EPS94_15510 | Not Available | Positive | 3201798 - 3202262 | 17249.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





