Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannitol transporter subunit iicb | EPS94_14960 | Not Available | Negative | 3081851 - 3083239 | 48990.1 |
| pts mannitol transporter subunit iia | EPS94_14965 | Not Available | Negative | 3083267 - 3083710 | 15984.3 |
| prohibitin family protein | EPS94_14970 | Not Available | Positive | 3084087 - 3084995 | 33040.8 |
| transketolase | EPS94_14975 | Not Available | Negative | 3085215 - 3087206 | 72200.6 |
| metalloprotease | EPS94_14980 | Not Available | Positive | 3087484 - 3088242 | 26977.0 |
| agmatinase | EPS94_14985 | Not Available | Negative | 3088446 - 3089366 | 33572.9 |
| hypothetical protein | EPS94_14990 | Not Available | Negative | 3089502 - 3090233 | 26352.8 |
| biosynthetic arginine decarboxylase | EPS94_14995 | Not Available | Negative | 3090379 - 3092355 | 73890.6 |
| acid stress response protein yqgb | EPS94_15000 | Not Available | Negative | 3092364 - 3092495 | 4859.08 |
| hypothetical protein | EPS94_15005 | Not Available | Positive | 3092631 - 3092846 | 8148.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





