Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | EPS94_14855 | Not Available | Negative | 3063629 - 3064861 | 44178.4 |
| ribose-5-phosphate isomerase rpia | EPS94_14860 | Not Available | Negative | 3065117 - 3065776 | 22861.8 |
| hypothetical protein | EPS94_14865 | Not Available | Negative | 3065832 - 3066062 | 8372.49 |
| lysr family transcriptional regulator argp | EPS94_14870 | Not Available | Positive | 3066203 - 3067096 | 33473.6 |
| methylmalonyl-coa mutase | EPS94_14875 | Not Available | Positive | 3067299 - 3068354 | 38947.6 |
| lysr family transcriptional regulator | EPS94_14880 | Not Available | Negative | 3068351 - 3069247 | 34763.7 |
| oxidative stress defense protein | EPS94_14885 | Not Available | Negative | 3069405 - 3070145 | 26628.7 |
| arginine exporter argo | EPS94_14890 | Not Available | Negative | 3070238 - 3070870 | 23075.9 |
| small-conductance mechanosensitive channel mscs | EPS94_14895 | Not Available | Negative | 3071009 - 3071869 | 30870.8 |
| class ii fructose-bisphosphate aldolase | EPS94_14900 | Not Available | Negative | 3072060 - 3073139 | 39207.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





