Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EPS94_00055 | Not Available | Positive | 9782 - 10861 | 36862.2 |
| l,d-transpeptidase | EPS94_00060 | Not Available | Positive | 10923 - 11858 | 34447.3 |
| hypothetical protein | EPS94_00065 | Not Available | Positive | 12177 - 12575 | 15072.0 |
| colibactin biosynthesis phosphopantetheinyl transferase clba | EPS94_00080 | Not Available | Negative | 13879 - 14613 | 28673.5 |
| colibactin biosynthesis luxr family transcriptional regulator clbr | EPS94_00085 | Not Available | Negative | 14616 - 14828 | 8259.03 |
| hypothetical protein | EPS94_00090 | Not Available | Negative | 15035 - 15223 | 7441.23 |
| colibactin hybrid non-ribosomal peptide synthetase/type i polyketide synthase clbb | EPS94_00095 | Not Available | Positive | 15262 - 24882 | 352574.0 |
| colibactin polyketide synthase clbc | EPS94_00100 | Not Available | Positive | 24923 - 27523 | 94649.4 |
| colibactin biosynthesis dehydrogenase clbd | EPS94_00105 | Not Available | Positive | 27533 - 28402 | 32488.4 |
| colibactin biosynthesis aminomalonyl-acyl carrier protein clbe | EPS94_00110 | Not Available | Positive | 28432 - 28680 | 9474.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





