Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | EPS94_14340 | Not Available | Positive | 2940642 - 2943122 | 91729.6 |
| hypothetical protein | EPS94_14350 | Not Available | Positive | 2944876 - 2945709 | 32021.6 |
| hypothetical protein | EPS94_14355 | Not Available | Positive | 2945678 - 2945971 | 11526.8 |
| paar domain-containing protein | EPS94_14360 | Not Available | Positive | 2946435 - 2946695 | 8846.61 |
| hypothetical protein | EPS94_14365 | Not Available | Positive | 2946616 - 2947833 | 47018.0 |
| type vi secretion protein vask | EPS94_14370 | Not Available | Positive | 2947843 - 2951196 | 125355.0 |
| type vi secretion system protein tssa | EPS94_14375 | Not Available | Positive | 2951189 - 2952799 | 60054.1 |
| paar domain-containing protein | EPS94_14380 | Not Available | Positive | 2952805 - 2954382 | 58843.0 |
| hypothetical protein | EPS94_14385 | Not Available | Positive | 2954382 - 2955011 | 24702.1 |
| duf1240 domain-containing protein | EPS94_14390 | Not Available | Positive | 2955268 - 2955711 | 16957.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





