Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EPS94_14225 | Not Available | Negative | 2916433 - 2917314 | 33324.5 |
| cysteine/o-acetylserine transporter | EPS94_14230 | Not Available | Positive | 2917417 - 2918004 | 21279.5 |
| autonomous glycyl radical cofactor grca | EPS94_14235 | Not Available | Negative | 2918060 - 2918443 | 14269.0 |
| uracil-dna glycosylase | EPS94_14240 | Not Available | Positive | 2918748 - 2919437 | 25682.6 |
| trna/rrna methyltransferase | EPS94_14245 | Not Available | Negative | 2919485 - 2920522 | 37852.5 |
| thioredoxin trxc | EPS94_14250 | Not Available | Positive | 2920729 - 2921148 | 15555.6 |
| dtw domain-containing protein | EPS94_14255 | Not Available | Positive | 2921217 - 2921915 | 26095.6 |
| protein lysine acetyltransferase | EPS94_14260 | Not Available | Positive | 2921947 - 2924607 | 97968.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EPS94_14265 | Not Available | Positive | 2924721 - 2926076 | 52804.8 |
| yfim family lipoprotein | EPS94_14270 | Not Available | Positive | 2926122 - 2926445 | 11854.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





