Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | EPS94_14175 | Not Available | Negative | 2906505 - 2907479 | 35948.3 |
| elongation factor 4 | EPS94_14180 | Not Available | Negative | 2907495 - 2909294 | 66516.1 |
| soxr-reducing system protein rsec | EPS94_14185 | Not Available | Negative | 2909492 - 2909971 | 16674.3 |
| sigma-e factor regulatory protein rseb | EPS94_14190 | Not Available | Negative | 2909968 - 2910924 | 35737.7 |
| anti-sigma-e factor rsea | EPS94_14195 | Not Available | Negative | 2910924 - 2911574 | 24350.9 |
| rna polymerase sigma factor rpoe | EPS94_14200 | Not Available | Negative | 2911607 - 2912182 | 21697.0 |
| rpoe leader peptide rsed | EPS94_14205 | Not Available | Negative | 2912179 - 2912334 | 6229.83 |
| l-aspartate oxidase | EPS94_14210 | Not Available | Positive | 2912590 - 2914212 | 60153.6 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | EPS94_14215 | Not Available | Negative | 2914197 - 2914934 | 27274.4 |
| atp-dependent rna helicase srmb | EPS94_14220 | Not Available | Positive | 2915066 - 2916400 | 49901.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





