Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1176 domain-containing protein | EPS94_13725 | Not Available | Negative | 2791788 - 2792831 | 38809.6 |
| gdp-mannose pyrophosphatase nudk | EPS94_13730 | Not Available | Negative | 2792957 - 2793532 | 21723.0 |
| oxidoreductase fes-binding subunit | EPS94_13735 | Not Available | Negative | 2793600 - 2795579 | 71829.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | EPS94_13740 | Not Available | Positive | 2795785 - 2797485 | 63659.6 |
| multidrug efflux rnd transporter permease acrd | EPS94_13745 | Not Available | Positive | 2797649 - 2800762 | 113054.0 |
| hypothetical protein | EPS94_13750 | Not Available | Negative | 2800861 - 2800920 | 2408.02 |
| arsc family reductase | EPS94_13755 | Not Available | Positive | 2801301 - 2801657 | 13586.3 |
| succinyl-diaminopimelate desuccinylase | EPS94_13760 | Not Available | Positive | 2801661 - 2802788 | 41271.4 |
| ypfn family protein | EPS94_13765 | Not Available | Positive | 2802816 - 2803016 | 8071.78 |
| esterase | EPS94_13770 | Not Available | Negative | 2803097 - 2803795 | 24766.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





