Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase ucpa | EPS94_13575 | Not Available | Negative | 2762935 - 2763726 | 27865.7 |
| hypothetical protein | EPS94_13580 | Not Available | Negative | 2763867 - 2764097 | 8523.04 |
| n-acetylmuramic acid 6-phosphate etherase | EPS94_13585 | Not Available | Positive | 2764006 - 2764902 | 31163.8 |
| pts n-acetylmuramic acid transporter subunits iibc | EPS94_13590 | Not Available | Positive | 2764906 - 2766330 | 49818.0 |
| dyp-type peroxidase | EPS94_13595 | Not Available | Negative | 2766508 - 2767407 | 33086.2 |
| rpoe-regulated lipoprotein | EPS94_13600 | Not Available | Negative | 2767503 - 2768078 | 20859.6 |
| duf2919 domain-containing protein | EPS94_13605 | Not Available | Negative | 2768139 - 2768588 | 17155.3 |
| acetyltransferase ypea | EPS94_13610 | Not Available | Negative | 2768575 - 2769000 | 16326.6 |
| n-acetylmuramoyl-l-alanine amidase amia | EPS94_13615 | Not Available | Positive | 2769214 - 2770083 | 31467.9 |
| oxygen-dependent coproporphyrinogen oxidase | EPS94_13620 | Not Available | Positive | 2770087 - 2770986 | 34305.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





