Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease | EPS94_13475 | Not Available | Negative | 2742923 - 2744179 | 46150.4 |
| xanthosine phosphorylase | EPS94_13480 | Not Available | Negative | 2744240 - 2745073 | 29912.4 |
| hypothetical protein | EPS94_13485 | Not Available | Positive | 2745322 - 2746086 | 29238.6 |
| lysr family transcriptional regulator | EPS94_13490 | Not Available | Negative | 2746125 - 2747051 | 33852.0 |
| bile acid:sodium symporter | EPS94_13495 | Not Available | Positive | 2747141 - 2748139 | 36377.8 |
| hypothetical protein | EPS94_13500 | Not Available | Negative | 2748136 - 2748354 | 8415.57 |
| nad-dependent dna ligase liga | EPS94_13505 | Not Available | Negative | 2748356 - 2750371 | 73618.2 |
| cell division protein zipa | EPS94_13510 | Not Available | Negative | 2750442 - 2751440 | 36938.9 |
| sulfate transporter cysz | EPS94_13515 | Not Available | Positive | 2751670 - 2752431 | 29306.6 |
| cysteine synthase a | EPS94_13520 | Not Available | Positive | 2752616 - 2753587 | 34491.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





