Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine coa-transferase | EPS94_13420 | Not Available | Positive | 2736124 - 2737341 | 45055.3 |
| crotonobetaine/carnitine-coa ligase | EPS94_13425 | Not Available | Positive | 2737414 - 2738967 | 58594.5 |
| carnitinyl-coa dehydratase | EPS94_13430 | Not Available | Positive | 2739076 - 2739861 | 28177.8 |
| carnitine operon protein caie | EPS94_13435 | Not Available | Positive | 2739867 - 2740457 | 21160.6 |
| carnitine metabolism transcriptional regulator caif | EPS94_13440 | Not Available | Negative | 2740576 - 2740971 | 15363.0 |
| hypothetical protein | EPS94_13445 | Not Available | Positive | 2741006 - 2741224 | 8144.12 |
| Trna-lys | Not Available | Not Available | Positive | 2741601 - 2741676 | Not Available |
| is200/is605-like element is200c family transposase | EPS94_13455 | Not Available | Negative | 2741261 - 2741602 | 13231.1 |
| lysr family transcriptional regulator | EPS94_13465 | Not Available | Negative | 2741787 - 2742671 | 33582.3 |
| xapx domain-containing protein | EPS94_13470 | Not Available | Negative | 2742712 - 2742870 | 5691.39 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





