Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | EPS94_13265 | Not Available | Positive | 2699600 - 2701210 | 59473.6 |
| thiamine abc transporter atp-binding protein thiq | EPS94_13270 | Not Available | Positive | 2701194 - 2701892 | 25089.8 |
| deda family protein | EPS94_13275 | Not Available | Negative | 2702006 - 2702770 | 28302.9 |
| hypothetical protein | EPS94_13280 | Not Available | Negative | 2702925 - 2703347 | 17141.5 |
| hypothetical protein | EPS94_13285 | Not Available | Negative | 2703354 - 2704202 | 33007.3 |
| arabinose operon transcriptional regulator arac | EPS94_13290 | Not Available | Negative | 2704717 - 2705562 | 32183.3 |
| ribulokinase | EPS94_13295 | Not Available | Positive | 2705901 - 2707601 | 61199.7 |
| l-arabinose isomerase | EPS94_13300 | Not Available | Positive | 2707612 - 2709114 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | EPS94_13305 | Not Available | Positive | 2709484 - 2710179 | 25416.2 |
| dna polymerase ii | EPS94_13310 | Not Available | Positive | 2710254 - 2712605 | 90112.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





