Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EPS94_12715 | Not Available | Negative | 2577323 - 2578081 | 28314.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EPS94_12720 | Not Available | Negative | 2578270 - 2579466 | 43360.5 |
| ribosome recycling factor | EPS94_12725 | Not Available | Negative | 2579558 - 2580115 | 20639.7 |
| ump kinase | EPS94_12730 | Not Available | Negative | 2580265 - 2580990 | 25971.9 |
| elongation factor ts | EPS94_12735 | Not Available | Negative | 2581137 - 2581988 | 30424.7 |
| 30s ribosomal protein s2 | EPS94_12740 | Not Available | Negative | 2582123 - 2582848 | 26745.2 |
| type i methionyl aminopeptidase | EPS94_12745 | Not Available | Positive | 2583216 - 2584010 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EPS94_12750 | Not Available | Positive | 2584072 - 2586744 | 102364.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EPS94_12755 | Not Available | Positive | 2586775 - 2587599 | 29892.8 |
| duf3461 family protein | EPS94_12760 | Not Available | Positive | 2587911 - 2588297 | 15097.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





