Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | EPS94_12665 | Not Available | Negative | 2564379 - 2567861 | 129918.0 |
| ribonuclease hii | EPS94_12670 | Not Available | Negative | 2567898 - 2568494 | 21511.3 |
| lipid-a-disaccharide synthase | EPS94_12675 | Not Available | Negative | 2568491 - 2569639 | 42357.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EPS94_12680 | Not Available | Negative | 2569639 - 2570427 | 28081.7 |
| 3-hydroxyacyl-acp dehydratase fabz | EPS94_12685 | Not Available | Negative | 2570431 - 2570886 | 17034.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EPS94_12690 | Not Available | Negative | 2570991 - 2572016 | 36084.8 |
| molecular chaperone skp | EPS94_12695 | Not Available | Negative | 2572020 - 2572505 | 17689.2 |
| outer membrane protein assembly factor bama | EPS94_12700 | Not Available | Negative | 2572627 - 2575059 | 90557.5 |
| sigma e protease regulator rsep | EPS94_12705 | Not Available | Negative | 2575089 - 2576441 | 49088.3 |
| phosphatidate cytidylyltransferase | EPS94_12710 | Not Available | Negative | 2576453 - 2577310 | 31511.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





