Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | EPS94_12610 | Not Available | Positive | 2554257 - 2555975 | 63606.2 |
| yaef family permuted papain-like enzyme | EPS94_12615 | Not Available | Positive | 2556028 - 2556852 | 29972.9 |
| envelope stress response activation lipoprotein nlpe | EPS94_12620 | Not Available | Negative | 2557008 - 2557718 | 25817.7 |
| aminoacyl-trna hydrolase | EPS94_12625 | Not Available | Negative | 2557732 - 2558154 | 15638.9 |
| yaeq family protein | EPS94_12630 | Not Available | Negative | 2558151 - 2558696 | 20847.7 |
| rho-binding antiterminator | EPS94_12640 | Not Available | Positive | 2559051 - 2559311 | 9622.37 |
| trna lysidine(34) synthetase tils | EPS94_12645 | Not Available | Negative | 2559359 - 2560657 | 48041.9 |
| voc family protein | EPS94_12650 | Not Available | Negative | 2560722 - 2561111 | 14739.5 |
| lysine decarboxylase ldcc | EPS94_12655 | Not Available | Negative | 2561168 - 2563309 | 80476.7 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EPS94_12660 | Not Available | Negative | 2563407 - 2564366 | 35273.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





