Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | EPS94_12555 | Not Available | Positive | 2545661 - 2546035 | 13737.9 |
| 30s ribosomal protein s7 | EPS94_12560 | Not Available | Positive | 2546132 - 2546602 | 17605.4 |
| elongation factor g | EPS94_12565 | Not Available | Positive | 2546699 - 2548813 | 77585.8 |
| elongation factor tu | EPS94_12570 | Not Available | Positive | 2548884 - 2549095 | 7595.95 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EPS94_12580 | Not Available | Negative | 2549628 - 2550200 | 21146.2 |
| d-methionine abc transporter, atp-binding protein | EPS94_12585 | Not Available | Positive | 2550388 - 2551419 | 37804.7 |
| d-methionine abc transporter permease meti | EPS94_12590 | Not Available | Positive | 2551412 - 2552065 | 23253.6 |
| metq/nlpa family lipoprotein | EPS94_12595 | Not Available | Positive | 2552105 - 2552920 | 29433.3 |
| rcs stress response system protein rcsf | EPS94_12600 | Not Available | Positive | 2553038 - 2553442 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EPS94_12605 | Not Available | Positive | 2553439 - 2554146 | 26379.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





