Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adenosine monophosphate-protein transferase fic | EPS94_12455 | Not Available | Positive | 2528751 - 2529353 | 23135.5 |
| aminodeoxychorismate synthase component 2 | EPS94_12460 | Not Available | Positive | 2529385 - 2529948 | 20787.1 |
| aspartate aminotransferase family protein | EPS94_12465 | Not Available | Positive | 2530034 - 2531254 | 43836.5 |
| hypothetical protein | EPS94_12470 | Not Available | Negative | 2531321 - 2533411 | 79491.6 |
| camp-activated global transcriptional regulator crp | EPS94_12475 | Not Available | Negative | 2533462 - 2534094 | 23641.9 |
| osmc family protein | EPS94_12480 | Not Available | Positive | 2534396 - 2534800 | 14517.6 |
| phosphoribulokinase | EPS94_12485 | Not Available | Negative | 2534855 - 2535724 | 32335.8 |
| yheu family protein | EPS94_12490 | Not Available | Negative | 2535778 - 2535996 | 8486.04 |
| hydrolase | EPS94_12495 | Not Available | Negative | 2535990 - 2537012 | 38571.5 |
| abc transporter atp-binding protein | EPS94_12500 | Not Available | Negative | 2537012 - 2538925 | 71845.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





