Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna-methyltransferase | EPS94_12350 | Not Available | Positive | 2509638 - 2510474 | 32087.2 |
| ribulose-phosphate 3-epimerase | EPS94_12355 | Not Available | Positive | 2510492 - 2511169 | 24555.7 |
| phosphoglycolate phosphatase | EPS94_12360 | Not Available | Positive | 2511162 - 2511920 | 27389.8 |
| tryptophan--trna ligase | EPS94_12365 | Not Available | Positive | 2511913 - 2512917 | 37425.9 |
| hypothetical protein | EPS94_12370 | Not Available | Positive | 2513077 - 2513982 | 33537.4 |
| prd domain-containing protein | EPS94_12375 | Not Available | Positive | 2513999 - 2514361 | 13515.4 |
| yhfx family plp-dependent enzyme | EPS94_12380 | Not Available | Positive | 2514445 - 2515608 | 42502.8 |
| phosphopentomutase | EPS94_12385 | Not Available | Positive | 2515609 - 2516835 | 44593.2 |
| phosphotriesterase-related protein | EPS94_12390 | Not Available | Positive | 2516832 - 2517710 | 32871.4 |
| duf2620 domain-containing protein | EPS94_12395 | Not Available | Positive | 2517721 - 2518074 | 12479.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





