Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp compounds hydrolase nude | EPS94_12300 | Not Available | Positive | 2499402 - 2499962 | 21094.3 |
| carboxypeptidase/penicillin-binding protein 1a | EPS94_12305 | Not Available | Negative | 2500128 - 2502680 | 93679.4 |
| dna utilization protein hofm | EPS94_12310 | Not Available | Positive | 2502800 - 2503579 | 29092.0 |
| dna utilization protein hofn | EPS94_12315 | Not Available | Positive | 2503579 - 2504118 | 20923.3 |
| dna utilization protein hofo | EPS94_12320 | Not Available | Positive | 2504102 - 2504542 | 16923.2 |
| dna utilization protein hofp | EPS94_12325 | Not Available | Positive | 2504532 - 2504936 | 15128.1 |
| dna transporter hofq | EPS94_12330 | Not Available | Positive | 2504848 - 2506086 | 44842.0 |
| shikimate kinase arok | EPS94_12335 | Not Available | Positive | 2506487 - 2507008 | 19539.2 |
| 3-dehydroquinate synthase | EPS94_12340 | Not Available | Positive | 2507065 - 2508153 | 38856.3 |
| cell division protein damx | EPS94_12345 | Not Available | Positive | 2508245 - 2509531 | 46062.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





