Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | EPS94_12140 | Not Available | Positive | 2458544 - 2459665 | 40709.1 |
| hypothetical protein | EPS94_12145 | Not Available | Positive | 2459838 - 2460548 | 26704.4 |
| hypothetical protein | EPS94_12155 | Not Available | Positive | 2461321 - 2461926 | 23525.4 |
| glycerol-3-phosphate dehydrogenase | EPS94_12160 | Not Available | Negative | 2461980 - 2463485 | 56811.9 |
| thiosulfate sulfurtransferase glpe | EPS94_12165 | Not Available | Positive | 2463675 - 2464001 | 12085.1 |
| rhomboid family intramembrane serine protease glpg | EPS94_12170 | Not Available | Positive | 2464046 - 2464876 | 31308.5 |
| deor/glpr family transcriptional regulator | EPS94_12175 | Not Available | Positive | 2464893 - 2465651 | 28112.7 |
| sigma 54-dependent transcriptional regulator | EPS94_12180 | Not Available | Negative | 2465633 - 2467231 | 60236.5 |
| rtcb family protein | EPS94_12185 | Not Available | Positive | 2467420 - 2468646 | 45124.2 |
| rna 3'-terminal phosphate cyclase | EPS94_12190 | Not Available | Positive | 2468650 - 2469666 | 35898.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





