Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nikd | EPS94_11830 | Not Available | Negative | 2394044 - 2394808 | 26814.1 |
| nickel abc transporter permease subunit nikc | EPS94_11835 | Not Available | Negative | 2394808 - 2395641 | 30391.9 |
| nickel abc transporter permease subunit nikb | EPS94_11840 | Not Available | Negative | 2395638 - 2396582 | 35165.2 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | EPS94_11845 | Not Available | Negative | 2396582 - 2398156 | 58824.2 |
| 4'-phosphopantetheinyl transferase acpt | EPS94_11850 | Not Available | Negative | 2398267 - 2398854 | 21715.8 |
| ai-2e family transporter | EPS94_11855 | Not Available | Negative | 2398909 - 2399958 | 38562.8 |
| mfs transporter | EPS94_11860 | Not Available | Positive | 2400057 - 2401307 | 43502.1 |
| duf1795 domain-containing protein | EPS94_11865 | Not Available | Negative | 2401311 - 2401868 | 19787.7 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EPS94_11870 | Not Available | Negative | 2401941 - 2402606 | 25285.3 |
| sulfurtransferase tusa | EPS94_11875 | Not Available | Positive | 2402827 - 2403072 | 9095.09 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





