Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | EPS94_11725 | Not Available | Positive | 2373387 - 2374139 | 26906.7 |
| dipeptide/tripeptide permease dtpb | EPS94_11730 | Not Available | Negative | 2374188 - 2375657 | 53550.4 |
| universal stress protein uspa | EPS94_11740 | Not Available | Negative | 2375974 - 2376408 | 16067.3 |
| universal stress protein uspb | EPS94_11745 | Not Available | Positive | 2376799 - 2377134 | 13028.1 |
| low-affinity inorganic phosphate transporter 1 | EPS94_11750 | Not Available | Negative | 2377205 - 2378704 | 53392.4 |
| nad(p)/fad-dependent oxidoreductase | EPS94_11755 | Not Available | Positive | 2378936 - 2380129 | 43497.3 |
| duf2776 family protein | EPS94_11760 | Not Available | Negative | 2380216 - 2381268 | 37806.5 |
| hypothetical protein | EPS94_11765 | Not Available | Negative | 2381520 - 2381726 | 7835.4 |
| hlyd family secretion protein | EPS94_11770 | Not Available | Positive | 2382002 - 2383069 | 38732.4 |
| abc transporter atp-binding protein/permease | EPS94_11775 | Not Available | Positive | 2383066 - 2385801 | 100746.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





