Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | EPS94_11420 | Not Available | Negative | 2307827 - 2308618 | 30414.0 |
| endoribonuclease mazf | EPS94_11425 | Not Available | Negative | 2308690 - 2309025 | 12068.6 |
| mazf-maze toxin-antitoxin system antitoxin maze | EPS94_11430 | Not Available | Negative | 2309025 - 2309273 | 9356.24 |
| gtp pyrophosphokinase | EPS94_11435 | Not Available | Negative | 2309351 - 2311585 | 83880.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EPS94_11440 | Not Available | Negative | 2311633 - 2312934 | 47992.0 |
| two-component sensor histidine kinase bara | EPS94_11445 | Not Available | Positive | 2312991 - 2315747 | 102445.0 |
| glucarate dehydratase | EPS94_11450 | Not Available | Negative | 2315978 - 2317318 | 49096.9 |
| glucarate dehydratase | EPS94_11455 | Not Available | Negative | 2317339 - 2318679 | 48967.5 |
| mfs transporter | EPS94_11460 | Not Available | Negative | 2318681 - 2320033 | 49145.0 |
| flavodoxin | EPS94_11465 | Not Available | Negative | 2320467 - 2320916 | 16302.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





