Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-valine transporter subunit ygah | EPS94_10915 | Not Available | Positive | 2211348 - 2211683 | 12040.3 |
| multidrug efflux transporter emrab transcriptional repressor emrr | EPS94_10920 | Not Available | Positive | 2211774 - 2212304 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | EPS94_10925 | Not Available | Positive | 2212431 - 2213603 | 42724.5 |
| multidrug efflux mfs transporter permease subunit emrb | EPS94_10930 | Not Available | Positive | 2213620 - 2215158 | 55609.6 |
| 2'-5' rna ligase | EPS94_10935 | Not Available | Positive | 2215416 - 2216123 | 27772.3 |
| poly(a) polymerase | EPS94_10940 | Not Available | Positive | 2216120 - 2217232 | 43236.1 |
| s-ribosylhomocysteine lyase | EPS94_10945 | Not Available | Negative | 2217283 - 2217798 | 19417.3 |
| glutamate--cysteine ligase | EPS94_10950 | Not Available | Negative | 2217949 - 2219505 | 58272.5 |
| deda family protein | EPS94_10955 | Not Available | Negative | 2219578 - 2220006 | 15604.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EPS94_10960 | Not Available | Negative | 2220003 - 2220569 | 20800.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





