Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS94_10765 | Not Available | Negative | 2186338 - 2187249 | 33933.5 |
| hypothetical protein | EPS94_10770 | Not Available | Positive | 2187215 - 2187478 | 10118.6 |
| hypothetical protein | EPS94_10775 | Not Available | Negative | 2187429 - 2187611 | 6415.82 |
| carbon starvation induced protein csid | EPS94_10780 | Not Available | Positive | 2188110 - 2189087 | 37375.6 |
| l-2-hydroxyglutarate oxidase | EPS94_10785 | Not Available | Positive | 2189107 - 2190375 | 46040.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EPS94_10790 | Not Available | Positive | 2190398 - 2191846 | 51832.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EPS94_10795 | Not Available | Positive | 2191860 - 2193140 | 45632.2 |
| gaba permease | EPS94_10800 | Not Available | Positive | 2193378 - 2194778 | 51115.1 |
| dna-binding transcriptional regulator csir | EPS94_10805 | Not Available | Positive | 2194799 - 2195461 | 25048.4 |
| peptidoglycan-binding protein lysm | EPS94_10810 | Not Available | Negative | 2195462 - 2195911 | 16064.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





