Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydratase | EPS94_10330 | Not Available | Positive | 2126210 - 2127370 | 43056.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | EPS94_10335 | Not Available | Negative | 2127413 - 2128534 | 42032.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | EPS94_10340 | Not Available | Negative | 2128545 - 2129615 | 38776.2 |
| duf2799 domain-containing protein | EPS94_10345 | Not Available | Positive | 2129825 - 2130190 | 13232.4 |
| yfir family protein | EPS94_10350 | Not Available | Positive | 2130339 - 2130857 | 18947.1 |
| diguanylate cyclase dgcn | EPS94_10355 | Not Available | Positive | 2130847 - 2132073 | 45973.0 |
| ompa family protein | EPS94_10360 | Not Available | Positive | 2132089 - 2132571 | 17315.7 |
| 50s ribosomal protein l19 | EPS94_10365 | Not Available | Negative | 2132648 - 2132995 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EPS94_10370 | Not Available | Negative | 2133037 - 2133804 | 28424.0 |
| ribosome maturation factor rimm | EPS94_10375 | Not Available | Negative | 2133835 - 2134383 | 20606.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





