Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EPS94_10280 | Not Available | Positive | 2115356 - 2115958 | 22586.5 |
| alpha,alpha-trehalase tref | EPS94_10285 | Not Available | Negative | 2116009 - 2117658 | 63727.1 |
| cytochrome c peroxidase | EPS94_10290 | Not Available | Positive | 2118063 - 2119460 | 51572.3 |
| glutamate decarboxylase | EPS94_10295 | Not Available | Positive | 2119671 - 2119876 | 7911.3 |
| atp-dependent chaperone clpb | EPS94_10300 | Not Available | Negative | 2120066 - 2122639 | 95618.9 |
| polyphenol oxidase | EPS94_10305 | Not Available | Negative | 2122769 - 2123500 | 26355.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | EPS94_10310 | Not Available | Negative | 2123497 - 2124477 | 37157.9 |
| outer membrane protein assembly factor bamd | EPS94_10315 | Not Available | Positive | 2124612 - 2125349 | 27830.9 |
| ribosome-associated translation inhibitor raia | EPS94_10320 | Not Available | Positive | 2125619 - 2125960 | 12785.3 |
| hypothetical protein | EPS94_10325 | Not Available | Positive | 2126064 - 2126111 | 1912.35 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





