Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcsc | EPS94_10230 | Not Available | Positive | 2098237 - 2101710 | 127952.0 |
| biofilm formation regulator hmsp | EPS94_10235 | Not Available | Positive | 2101792 - 2103780 | 74483.9 |
| dicarboxylate/amino acid:cation symporter | EPS94_10240 | Not Available | Positive | 2103963 - 2105249 | 45439.2 |
| insulinase family protein | EPS94_10245 | Not Available | Positive | 2105469 - 2106965 | 55500.4 |
| sugar kinase | EPS94_10250 | Not Available | Negative | 2107061 - 2107990 | 34009.3 |
| cyclic-guanylate-specific phosphodiesterase | EPS94_10255 | Not Available | Positive | 2108222 - 2108989 | 29547.8 |
| asma family protein | EPS94_10260 | Not Available | Positive | 2109059 - 2111119 | 74416.7 |
| mfs transporter | EPS94_10265 | Not Available | Negative | 2111160 - 2112482 | 47226.9 |
| inner membrane protein yhjd | EPS94_10270 | Not Available | Negative | 2112875 - 2113888 | 37902.6 |
| lysr family transcriptional regulator | EPS94_10275 | Not Available | Negative | 2113937 - 2114836 | 33237.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





