Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | EPS94_10065 | Not Available | Negative | 2065523 - 2066518 | 37629.2 |
| hypothetical protein | EPS94_10070 | Not Available | Positive | 2066693 - 2066992 | 11316.8 |
| glycine--trna ligase subunit alpha | EPS94_10075 | Not Available | Positive | 2067087 - 2067998 | 34718.2 |
| glycine--trna ligase subunit beta | EPS94_10080 | Not Available | Positive | 2068008 - 2070077 | 76817.2 |
| type i toxin-antitoxin system toxin hoka | EPS94_10085 | Not Available | Positive | 2070400 - 2070552 | 5998.6 |
| rna chaperone/antiterminator cspa | EPS94_10090 | Not Available | Negative | 2070740 - 2070952 | 7403.66 |
| hth-type transcriptional regulator | EPS94_10095 | Not Available | Negative | 2071233 - 2071523 | 11033.5 |
| duf3053 domain-containing protein | EPS94_10100 | Not Available | Positive | 2071957 - 2072667 | 25664.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | EPS94_10105 | Not Available | Negative | 2072717 - 2073691 | 35398.5 |
| ompa family lipoprotein | EPS94_10110 | Not Available | Negative | 2073795 - 2074454 | 22258.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





