Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | EPS94_10015 | Not Available | Negative | 2052966 - 2054996 | 75775.5 |
| protein bax | EPS94_10020 | Not Available | Positive | 2055316 - 2056140 | 30869.3 |
| xylose operon transcription regulator xylr | EPS94_10025 | Not Available | Negative | 2056248 - 2057426 | 44871.7 |
| sugar abc transporter permease | EPS94_10030 | Not Available | Negative | 2057504 - 2058685 | 41063.4 |
| d-xylose abc transporter atp-binding protein | EPS94_10035 | Not Available | Negative | 2058663 - 2060204 | 56375.8 |
| d-xylose abc transporter substrate-binding protein | EPS94_10040 | Not Available | Negative | 2060282 - 2061274 | 35722.1 |
| xylose isomerase | EPS94_10045 | Not Available | Positive | 2061640 - 2062962 | 49721.7 |
| xylulokinase | EPS94_10050 | Not Available | Positive | 2063034 - 2064488 | 52613.4 |
| hypothetical protein | EPS94_10055 | Not Available | Positive | 2064657 - 2064998 | 12523.9 |
| yiab family inner membrane protein | EPS94_10060 | Not Available | Positive | 2065044 - 2065481 | 16096.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





