Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS94_09410 | Not Available | Negative | 1933757 - 1934050 | 11061.4 |
| lipoprotein nlpa | EPS94_09415 | Not Available | Positive | 1934272 - 1935090 | 29416.2 |
| dmt family transporter | EPS94_09420 | Not Available | Negative | 1935094 - 1936017 | 33143.5 |
| hypothetical protein | EPS94_09430 | Not Available | Negative | 1936823 - 1937044 | 8553.38 |
| hydroxyacid dehydrogenase | EPS94_09435 | Not Available | Negative | 1937252 - 1938289 | 40226.7 |
| Trna-sec(p) | Not Available | Not Available | Positive | 1938346 - 1938436 | Not Available |
| glycoside-pentoside-hexuronide family transporter | EPS94_09445 | Not Available | Positive | 1938729 - 1940111 | 51013.5 |
| alpha-xylosidase | EPS94_09450 | Not Available | Positive | 1940121 - 1942439 | 88076.0 |
| prd domain-containing protein | EPS94_09455 | Not Available | Positive | 1942734 - 1944287 | 58943.1 |
| pts sugar transporter subunit iia | EPS94_09460 | Not Available | Positive | 1944314 - 1944784 | 17425.7 |
Pathways
456 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





