Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | EPS94_09205 | Not Available | Negative | 1891994 - 1893640 | 61543.5 |
| membrane protein insertion efficiency factor yidd | EPS94_09210 | Not Available | Negative | 1893643 - 1893900 | 9381.61 |
| ribonuclease p protein component | EPS94_09215 | Not Available | Negative | 1893864 - 1894223 | 13790.0 |
| 50s ribosomal protein l34 | EPS94_09220 | Not Available | Negative | 1894240 - 1894380 | 5380.74 |
| hypothetical protein | EPS94_09225 | Not Available | Negative | 1894610 - 1894690 | 3202.81 |
| chromosomal replication initiator protein dnaa | EPS94_09230 | Not Available | Positive | 1894987 - 1896390 | 52553.7 |
| dna polymerase iii subunit beta | EPS94_09235 | Not Available | Positive | 1896395 - 1897495 | 40589.1 |
| dna replication/repair protein recf | EPS94_09240 | Not Available | Positive | 1897495 - 1898568 | 40516.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EPS94_09245 | Not Available | Positive | 1898597 - 1901011 | 89941.0 |
| duf937 domain-containing protein | EPS94_09250 | Not Available | Positive | 1901242 - 1901649 | 14170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





