Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | EPS94_08890 | Not Available | Negative | 1827129 - 1828058 | 32278.4 |
| ribose abc transporter substrate-binding protein rbsb | EPS94_08895 | Not Available | Negative | 1828184 - 1829074 | 30940.2 |
| ribose abc transporter permease | EPS94_08900 | Not Available | Negative | 1829099 - 1830064 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | EPS94_08905 | Not Available | Negative | 1830069 - 1831574 | 55044.1 |
| d-ribose pyranase | EPS94_08910 | Not Available | Negative | 1831582 - 1832001 | 15240.4 |
| low affinity potassium transporter kup | EPS94_08915 | Not Available | Negative | 1832168 - 1834036 | 69298.3 |
| atpase rava | EPS94_08920 | Not Available | Positive | 1834259 - 1835755 | 56354.1 |
| atpase rava stimulator viaa | EPS94_08925 | Not Available | Positive | 1835749 - 1837200 | 55942.7 |
| aspartate--ammonia ligase | EPS94_08930 | Not Available | Negative | 1837205 - 1838197 | 36738.7 |
| transcriptional regulator asnc | EPS94_08935 | Not Available | Positive | 1838349 - 1838807 | 16888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





