Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent endonuclease | EPS94_05885 | Not Available | Positive | 1195919 - 1197577 | 63560.9 |
| duf535 domain-containing protein | EPS94_05890 | Not Available | Negative | 1197574 - 1198566 | 38254.7 |
| maca family efflux pump subunit | EPS94_05895 | Not Available | Positive | 1198681 - 1199796 | 40731.5 |
| macrolide abc transporter atp-binding protein/permease macb | EPS94_05900 | Not Available | Positive | 1199793 - 1201739 | 70636.7 |
| cold shock-like protein cspd | EPS94_05905 | Not Available | Negative | 1201812 - 1202036 | 7969.41 |
| atp-dependent clp protease adapter clps | EPS94_05910 | Not Available | Positive | 1202359 - 1202679 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | EPS94_05915 | Not Available | Positive | 1202710 - 1204986 | 84211.9 |
| type i-f crispr-associated endonuclease cas1 | EPS94_05920 | Not Available | Positive | 1205879 - 1206862 | 36492.7 |
| type i-f crispr-associated helicase cas3 | EPS94_05925 | Not Available | Positive | 1206859 - 1210092 | 122098.0 |
| type i-f crispr-associated protein csy1 | EPS94_05935 | Not Available | Positive | 1210422 - 1211729 | 49430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





