Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease degs | EPT01_00200 | Not Available | Negative | 40391 - 41458 | 37583.4 |
| serine endoprotease degq | EPT01_00205 | Not Available | Negative | 41548 - 42915 | 47207.9 |
| duf1043 family protein | EPT01_00210 | Not Available | Negative | 43069 - 43467 | 14961.7 |
| cell division protein zape | EPT01_00215 | Not Available | Positive | 43661 - 44788 | 43066.0 |
| 50s ribosomal protein l13 | EPT01_00220 | Not Available | Positive | 45007 - 45435 | 16019.5 |
| 30s ribosomal protein s9 | EPT01_00225 | Not Available | Positive | 45451 - 45843 | 14857.1 |
| stringent starvation protein a | EPT01_00230 | Not Available | Positive | 46238 - 46876 | 24306.3 |
| clpxp protease specificity-enhancing factor | EPT01_00235 | Not Available | Positive | 46882 - 47379 | 18290.5 |
| c4-dicarboxylate transporter dcuc | EPT01_00240 | Not Available | Negative | 47422 - 48789 | 48833.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 48843 - 48958 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





