Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine coa-transferase | EPT01_03260 | Not Available | Positive | 652734 - 653951 | 45101.2 |
| crotonobetaine/carnitine-coa ligase | EPT01_03265 | Not Available | Positive | 654025 - 655578 | 58520.3 |
| carnitinyl-coa dehydratase | EPT01_03270 | Not Available | Positive | 655687 - 656472 | 28191.8 |
| carnitine operon protein caie | EPT01_03275 | Not Available | Positive | 656478 - 657068 | 21167.5 |
| carnitine metabolism transcriptional regulator caif | EPT01_03280 | Not Available | Negative | 657277 - 657672 | 15437.1 |
| carbamoyl-phosphate synthase large subunit | EPT01_03285 | Not Available | Negative | 657934 - 661155 | 117849.0 |
| carbamoyl-phosphate synthase small subunit | EPT01_03290 | Not Available | Negative | 661173 - 662321 | 41445.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EPT01_03295 | Not Available | Negative | 662777 - 663598 | 28745.3 |
| ribonucleoside hydrolase rihc | EPT01_03300 | Not Available | Negative | 663765 - 664679 | 32615.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EPT01_03305 | Not Available | Negative | 664745 - 665695 | 34776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





