Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-succinylarginine dihydrolase | EPT01_02280 | Not Available | Negative | 436058 - 437401 | 49301.4 |
| succinylglutamate-semialdehyde dehydrogenase | EPT01_02285 | Not Available | Negative | 437398 - 438876 | 53015.3 |
| arginine n-succinyltransferase | EPT01_02290 | Not Available | Negative | 438873 - 439907 | 38458.0 |
| aspartate aminotransferase family protein | EPT01_02295 | Not Available | Negative | 439904 - 441124 | 43667.8 |
| exodeoxyribonuclease iii | EPT01_02300 | Not Available | Positive | 441570 - 442376 | 30970.9 |
| tvp38/tmem64 family membrane protein ydjx | EPT01_02305 | Not Available | Positive | 442543 - 443253 | 26059.7 |
| protein ydjy | EPT01_02310 | Not Available | Positive | 443258 - 443935 | 24126.6 |
| tvp38/tmem64 family protein | EPT01_02315 | Not Available | Positive | 443950 - 444657 | 26161.8 |
| carboxymuconolactone decarboxylase family protein | EPT01_02320 | Not Available | Positive | 444657 - 445205 | 20534.1 |
| abc transporter substrate-binding protein | EPT01_02325 | Not Available | Positive | 445215 - 446381 | 42832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





