Escherichia coli strain 52_rectal

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 52_rectal is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and possesses flagella, indicating its motility. This strain is primarily host-associated, found in various hosts including Homo sapiens, Gallus gallus, Bos taurus, and others across diverse taxa, such as Metazoa and Vertebrata. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range, which is ideal for growth in warm-blooded animals. E. coli strain 52_rectal has significant pathogenic potential, being associated with a wide array of health effects, particularly in humans. It is implicated in urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain can contribute to diverse clinical manifestations, including diarrhea, septicemia, and even colorectal cancer. The presence of such a broad spectrum of pathogenicity highlights its relevance in both clinical and public health contexts. The ecological role of E. coli strain 52_rectal as a free-living organism suggests it can thrive independently in various environments, potentially influencing microbial communities. Its association with numerous hosts underscores its adaptability and ability to spread across different ecological niches, which may have implications for infection control and understanding the dynamics of microbial transmission in both animal and human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 52_rectal

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 52_rectal
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 52_rectal


Gene Summary

Adenine Count

1279593 bp

Thymine Count

1283389 bp

Guanine Count

1320483 bp

Cytosine Count

1307343 bp

Genome Length

5200701 bp

Protein-coding Genes

4728 genes

Non-Coding Genes

404 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide/tripeptide permease dtpaEPT01_01710Not AvailablePositive321840 - 32334253994.4
glutathione transferase gstaEPT01_01715Not AvailablePositive323448 - 32405322869.6
pyridoxal kinaseEPT01_01720Not AvailableNegative324097 - 32495731173.8
tyrosine--trna ligaseEPT01_01725Not AvailableNegative325019 - 32629347529.6
pyridoxamine 5'-phosphate oxidaseEPT01_01730Not AvailableNegative326422 - 32707825546.6
c-type lysozyme inhibitorEPT01_01735Not AvailableNegative327137 - 32746612568.2
anhydro-n-acetylmuramic acid kinaseEPT01_01740Not AvailableNegative327564 - 32867339526.7
outer membrane lipoprotein slybEPT01_01745Not AvailablePositive328947 - 32941415602.7
transcriptional regulator slyaEPT01_01750Not AvailableNegative329461 - 32989516354.0
duf1656 domain-containing proteinEPT01_01755Not AvailablePositive330096 - 3303328891.33

Displaying genes 661 – 670 of 5134 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total