Escherichia coli strain 52_rectal

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 52_rectal is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and possesses flagella, indicating its motility. This strain is primarily host-associated, found in various hosts including Homo sapiens, Gallus gallus, Bos taurus, and others across diverse taxa, such as Metazoa and Vertebrata. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range, which is ideal for growth in warm-blooded animals. E. coli strain 52_rectal has significant pathogenic potential, being associated with a wide array of health effects, particularly in humans. It is implicated in urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain can contribute to diverse clinical manifestations, including diarrhea, septicemia, and even colorectal cancer. The presence of such a broad spectrum of pathogenicity highlights its relevance in both clinical and public health contexts. The ecological role of E. coli strain 52_rectal as a free-living organism suggests it can thrive independently in various environments, potentially influencing microbial communities. Its association with numerous hosts underscores its adaptability and ability to spread across different ecological niches, which may have implications for infection control and understanding the dynamics of microbial transmission in both animal and human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 52_rectal

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 52_rectal
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 52_rectal


Gene Summary

Adenine Count

1279593 bp

Thymine Count

1283389 bp

Guanine Count

1320483 bp

Cytosine Count

1307343 bp

Genome Length

5200701 bp

Protein-coding Genes

4728 genes

Non-Coding Genes

404 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucuronide uptake porin uidcEPT01_01610Not AvailableNegative300657 - 30192246650.3
glucuronide transporterEPT01_01615Not AvailableNegative301961 - 30333449894.9
beta-glucuronidaseEPT01_01620Not AvailableNegative303331 - 30514268476.7
tetr/acrr family transcriptional regulatorEPT01_01625Not AvailableNegative305533 - 30612321800.5
7-alpha-hydroxysteroid dehydrogenaseEPT01_01630Not AvailableNegative306344 - 30711126780.2
mal regulon transcriptional regulator maliEPT01_01635Not AvailableNegative307223 - 30825136626.9
pts maltose transporter subunit iicbEPT01_01640Not AvailablePositive308426 - 31001856690.6
pyridoxal phosphate-dependent aminotransferaseEPT01_01645Not AvailablePositive310028 - 31120043644.2
adenosine deaminaseEPT01_01650Not AvailablePositive311304 - 31230536399.6
oxidoreductaseEPT01_01655Not AvailableNegative312339 - 31337938244.5

Displaying genes 641 – 650 of 5134 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total