Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | EPT01_01370 | Not Available | Negative | 261221 - 262441 | 44318.8 |
| lysr family transcriptional regulator | EPT01_01375 | Not Available | Negative | 262576 - 263469 | 33283.4 |
| mfs transporter | EPT01_01380 | Not Available | Positive | 263576 - 264829 | 45260.2 |
| acid shock protein | EPT01_01385 | Not Available | Positive | 265226 - 265561 | 11639.1 |
| hypothetical protein | EPT01_01390 | Not Available | Positive | 265654 - 265737 | 3206.2 |
| serine protease | EPT01_01395 | Not Available | Positive | 265837 - 266658 | 29278.6 |
| hypothetical protein | EPT01_01535 | Not Available | Positive | 282924 - 283106 | 7013.49 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | EPT01_01545 | Not Available | Negative | 284043 - 285431 | 48726.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | EPT01_01550 | Not Available | Negative | 285442 - 286974 | 54626.6 |
| duf1471 domain-containing protein | EPT01_01555 | Not Available | Positive | 287498 - 288442 | 33903.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





