Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EPT01_00810 | Not Available | Positive | 162347 - 164641 | 85956.4 |
| enamine/imine deaminase | EPT01_00815 | Not Available | Positive | 164655 - 165044 | 14008.0 |
| l-serine dehydratase tdcg | EPT01_00820 | Not Available | Positive | 165116 - 166480 | 48524.6 |
| haaap family serine/threonine permease | EPT01_00825 | Not Available | Positive | 166755 - 168086 | 48317.6 |
| serine dehydratase subunit alpha family protein | EPT01_00830 | Not Available | Positive | 168114 - 169424 | 45363.8 |
| hypothetical protein | EPT01_00835 | Not Available | Negative | 169558 - 169722 | 5961.16 |
| pirin family protein | EPT01_00840 | Not Available | Negative | 169745 - 170446 | 25897.0 |
| lysr family transcriptional regulator | EPT01_00845 | Not Available | Positive | 170551 - 171447 | 33258.3 |
| duf805 domain-containing protein | EPT01_00850 | Not Available | Negative | 171498 - 171854 | 13456.7 |
| duf805 domain-containing protein | EPT01_00855 | Not Available | Negative | 172096 - 172461 | 14281.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





