Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoinase allb | EPT01_20210 | Not Available | Positive | 4094476 - 4095837 | 49618.5 |
| uracil/xanthine transporter | EPT01_20215 | Not Available | Positive | 4095894 - 4097195 | 47242.2 |
| glycerate 3-kinase | EPT01_20220 | Not Available | Positive | 4097217 - 4098362 | 38736.9 |
| (s)-ureidoglycine aminohydrolase | EPT01_20225 | Not Available | Negative | 4098590 - 4099375 | 28732.1 |
| allantoate amidohydrolase | EPT01_20230 | Not Available | Negative | 4099386 - 4100621 | 45678.5 |
| ureidoglycolate dehydrogenase | EPT01_20235 | Not Available | Negative | 4100643 - 4101692 | 37969.3 |
| acyl-coa synthetase fdra | EPT01_20240 | Not Available | Positive | 4102009 - 4103676 | 58532.3 |
| duf1116 domain-containing protein | EPT01_20245 | Not Available | Positive | 4103686 - 4104945 | 44952.6 |
| duf2877 domain-containing protein | EPT01_20250 | Not Available | Positive | 4104956 - 4105771 | 29620.8 |
| carbamate kinase | EPT01_20255 | Not Available | Positive | 4105768 - 4106661 | 31690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





